Survival-associated meQTLs across different cancer types
We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| PAAD | rs216295 | chr12:6154206 | C/T | 8.54E-13 | 178 | 15.55 | 15.27 | 1.37 | KM Plot |
| PAAD | rs216296 | chr12:6154670 | A/G | 1.02E-12 | 177 | 1.37 | 15.13 | 15.57 | KM Plot |
| PAAD | rs216297 | chr12:6155218 | G/A | 8.23E-13 | 178 | 1.37 | 15.13 | 15.57 | KM Plot |
| PAAD | rs216298 | chr12:6156477 | C/T | 8.59E-13 | 178 | 1.37 | 15.2 | 15.57 | KM Plot |
| PAAD | rs216300 | chr12:6157776 | A/G | 8.23E-13 | 178 | 1.37 | 15.13 | 15.57 | KM Plot |
| PAAD | rs216301 | chr12:6157988 | A/G | 8.23E-13 | 178 | 1.37 | 15.13 | 15.57 | KM Plot |
| PAAD | rs216302 | chr12:6158022 | G/A | 8.23E-13 | 178 | 1.37 | 15.13 | 15.57 | KM Plot |
| PAAD | rs216303 | chr12:6159045 | C/T | 1.32E-12 | 175 | 1.37 | 15.13 | 15.57 | KM Plot |
| PAAD | rs216314 | chr12:6136580 | T/C | 9.07E-13 | 177 | 1.37 | 14.73 | 15.62 | KM Plot |
| PAAD | rs216315 | chr12:6136914 | A/G | 7.71E-13 | 178 | 1.37 | 14.73 | 15.57 | KM Plot |
| PAAD | rs216318 | chr12:6139261 | A/C | 8.45E-13 | 178 | 1.37 | 14.33 | 15.62 | KM Plot |
| PAAD | rs216320 | chr12:6143356 | T/C | 9.27E-13 | 177 | 1.37 | 14.73 | 15.62 | KM Plot |
| PAAD | rs216321 | chr12:6143984 | T/C | 9.27E-13 | 177 | 1.37 | 14.73 | 15.62 | KM Plot |
| PAAD | rs216324 | chr12:6145225 | A/G | 9.27E-13 | 177 | 1.37 | 14.73 | 15.62 | KM Plot |
| PAAD | rs216335 | chr12:6148005 | T/C | 1.32E-12 | 175 | 1.37 | 14.73 | 15.57 | KM Plot |